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Structures of Peptides and
Proteins
Globular Proteins
Brazzein, NMR structure (1BRZ)
Brazzein, energy minimized from NMR
(2BRZ)
Calmodulin
(1CLM)
Carbonic Anhydrase (1CAH)
Cellulase
(1CEC)
Cytochrome (1HRC)
Hemoglobin deoxy
or T-state (1HGA)
Hemoglobin HbS, sickle cell (1HDS)
Histone octamer complex (1HIO)
HIV
Reverse Transcriptase (1REV)
HIV Protease with tripeptide inhibitor
(1A30)
Nucleosome
core particel (1AOI)
N-cadherin (1NCH)
Myoglobin,
deoxy, without oxygen (1MBN)
Myoglobin, oxy, with oxygen (1MBO)
Pyruvate
Kinase, E.coli (1PKY)
Subtilisin
(serine protease with inhibitor eglin) (1CSE)
TATA Box Binding Protein (1YTB)
TFIID TBP associated factor (1TAF)
Trypsin
(1BRB;
variant) with BPTI (variant)
Membrane Proteins
Beta-2 Adrenergic Receptor (GPCR)
- with antibody fragment (24R4)
- with lysozyme domain (2RH1)
Bacteriorhodopsin (1AP9)
- by X-ray (1AP9)
- by electron diffraction
(1AT9)
Bovine
Rhosdopsin (1F88)
Ca-ATPase
(P-type; muscle SR; 1EUL)
G-protein
coupled receptor (model)
Gap Junction Protein Beta2 hemi-channel (Connexin 26; 2ZW3)
Porin non specific; single subunit of OmpF (1PRN)
Porin maltose specific (1MAL);
with maltose (1AF6)
K-channel
Kcsa (1BL8)
Light
harvesting complex 2 (1KZU)
Reaction
center(1PRC)
A complete
list of known structures of membrane proteins at the Stephen
White laboratory at UC Irvine
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Structures
of Nucleic Acids, Polysaccharides, and Lipids
IMPORTANT
NOTICE: The following is a list of molecules from the Protein
Data Bank. You will need Chime
installed in your browser or use Rasmol
as a stand-alone program on your computer to view these images
after downloading the pdb files.
Nucleic Acids
Deoxy-Ribonucleic Acid (114D)
A-RNA (1SDR)
Transfer RNA (1TN2;
yest Phe-tRNA)
Anticodon loop (229D)
tRNA-synthetase complex (1GTR)
Polysaccharides
Hyaluronic acid
Disaccharides
(KEGG)
Polysaccharides
(KEGG)
Lipids
Plasma Membrane
POPC - Palmitoyl-oleoyl-phosphatidyl-choline
(view list of phospholipids
at KEGG)
DHPC - Diheptanoyl-phosphatidyl-choline
(detergent cmc 1.4mM; after opening file select 3D rendering)
Cholesterol
11-cis-retinal
Channel-forming
Peptides
Gramicidin A (dimer;
1MAG)
Molecular dynamics
simulation
Channel
recording in artifical membrane
(you need QuickTime3
to view movie)
Alamethicin (1MLT;
trimer shown; forms multimers)
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